LabAdviser/314/Preparation 314-307/Soft-matter: Difference between revisions

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<span style="background:#FF2800">THIS PAGE IS UNDER CONSTRUCTION</span>[[image:Under_construction.png|200px]]
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= Plunge Freezer =
<!--The FEI Vitrobot™ is used for vitrifying (freezing) single particle samples for cryo-TEM. The Vitrobot™ is fully automated and performs the cryo-fixation process at constant conditions (temperature, relative humidity, blotting and freezing velocity), which ensures high quality cryo-fixation. The sample is pipetted on a TEM grid, blotted and then plunged in liquid ethane, which is cooled with liquid nitrogen. The FEI Vitrobot™ Data Sheet is here [[:File:Vitrobot_Mark_IV_Datasheet.pdf]] and an example of the APV can be found here [[:File:APV_Vitrobot.pdf]].
The Vitrobot™ is located in building 314, in the Soft Mater (toxic) Lab. For further information on the machine usage contact ramona.mateiu@cen.dtu.dk.
[[File:Vitrobot.jpg|200px|thumb|left|DTU Cens FEI Vitrobot]]<br /> -->
== Leica EM GP2 ==
The Leica plunge freezer (EM GP2) is used to vitrifying (freezing) samples for cryo-TEM under liquid ethane temperature.
Operating manual:[[:File:Leica EM GP2 Operating manual.pdf]]
For further information on the machine usage contact mktracy@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=141983&cpid=260636&tab=0].
[[File:Plunge Freezer.jpg|400px|left|thumb|Leica EM GP2 Location at DTU Nanolab Building 314, Room 014 (Tecnai T20)]]<br />
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= Microtomes =
== RMC MT-7 Microtome ==
Our RMC MT-7 Microtome is a vintage piece of equipment and can be used for planning specimens for SEM/EDX and/or for cutting relative thin slices (approx. 200nm thick) for TEM. First, the specimen needs to be embedded into a resin or an epoxy, and then can be sliced with a glass or diamond knife.  At DTU Nanolab Cen we can offer only glass knifes. We also offer the possibility to make glass knives using the '''LKB Knifemaker 7801A'''.
Risk Assessment of RMC MT-7 Microtome: [[:File:APV RMC Microtome.pdf]]
Manual of LKB Knifemaker 7801A: [[:File:LKB Knifemaker 7800B Manual.pdf]]
For further information about the machine usage contact afull@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=65646&cpid=173468&tab=2&qt=dtupublicationquery].
[[File:RMC MT-7 + LKB Knifemaker.jpg|400px|thumb|left|LKB Knifemaker and RMC MT-7 Microtome Location at DTU Nanolab Building 314]]
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== Leica EM UC7 ==
The Leica ultramicrotome is used for ultra thin sectioning of sample embedded in resin block. Glass or diamond knife is used for ultra sectioning of the samples.
Operating manual: [[:File:EM UC7 Operating manual.pdf]]
Risk Assessment: [[:File:Risk assessment-Ultramicrotome EM UC7.docx]]
For further information about the machine usage contact mktracy@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=141983&cpid=260636&tab=0].
[[File:Leica EM UC7.jpg|400px|left|thumb|Leica EM UC7 Location at DTU Nanolab Building 307, Room 906]]<br />
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== Cryo-Ultramicrotome Leica EM FC7 ==
Operating manual: [[:File:EM FC7 Operating manual.pdf]]
Risk Assessment: [[:File:Risk assessment-Cryo-Ultramicrotome EM FC7.docx]]
For further information about the machine usage contact mktracy@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=141983&cpid=260636&tab=0].
[[File:Leica EM FC7.jpg|400px|left|thumb|Leica EM FC7 Location at DTU Nanolab Building 307, Room 906]]<br />
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= Critical point dryer =
== Leica EM CPD300 ==
The Critical Point Drier (CPD) is used for drying samples for the SEM. The machine uses the fact that at the critical point the solvent can be converted from liquid to gas without crossing the interfaces between liquid and gas (no surface tension) and hence no sample drying artefacts. CO2 is the solvent of choice as its triple point is suitable for biological samples (31°C and 74 bars). The CO2 is not miscible with water; therefore the sample should be dissolved in acetone or ethanol.
Operating manual: [[:File:EM CPD300 Operating manual.pdf]]
Risk Assessment: [[:File:Risk assessment- Leica EM CPD300.pdf]].
For further information on the machine usage contact mktracy@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=141983&cpid=260636&tab=0].
[[File: Leica EM CPD300.jpg|200px|thumb|left|Leica EM CPD300 Location at DTU Nanolab Building 314]]
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= Centrifuge =
The Mini Spinner Eppendorf is a desktop centrifuge with supplied rotor with maximum speed/force 13,400rpm/12,100xG. It has a 30-minute timer, which is settable in 15-sec increments. It has a short-spin mode fixed at maximum speed. The Mini Spinner Eppendorf is located in building 314, in the Soft Mater (toxic) Lab.
For further information on the machine usage contact mktracy@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=141983&cpid=260636&tab=0].
[[File: MINI Spin.jpg|200px|thumb|left|Location at DTU Nanolab Building 314]]
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= pH meter =
If you are planning on doing chemical fixation on biological samples you will probably need to make buffers and use a pH-meter. The pH-meter (model pH 1000L) is located in building 314, in the Soft Mater (toxic) Lab and it is dedicated to “Soft Matter” related work.
For further information on the machine usage contact mktracy@dtu.dk [https://www.dtu.dk/english/service/phonebook/person?id=141983&cpid=260636&tab=0].
[[File: pH meter.jpg|200px|thumb|left|Location at DTU Nanolab Building 314]]
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'''Feedback to this page''': '''[mailto:labadviser@nanolab.dtu.dk?Subject=Feed%20back%20from%20page%20http://labadviser.nanolab.dtu.dk/index.php/LabAdviser/314/Preparation_314-307/Soft-mater click here]'''
'''Feedback to this page''': '''[mailto:labadviser@nanolab.dtu.dk?Subject=Feed%20back%20from%20page%20http://labadviser.nanolab.dtu.dk/index.php/LabAdviser/314/Preparation_314-307/Soft-mater click here]'''

Revision as of 11:35, 23 March 2020

THIS PAGE IS UNDER CONSTRUCTION

Plunge Freezer

Leica EM GP2

The Leica plunge freezer (EM GP2) is used to vitrifying (freezing) samples for cryo-TEM under liquid ethane temperature.


Operating manual:File:Leica EM GP2 Operating manual.pdf


For further information on the machine usage contact mktracy@dtu.dk [1].


Leica EM GP2 Location at DTU Nanolab Building 314, Room 014 (Tecnai T20)




Microtomes

RMC MT-7 Microtome

Our RMC MT-7 Microtome is a vintage piece of equipment and can be used for planning specimens for SEM/EDX and/or for cutting relative thin slices (approx. 200nm thick) for TEM. First, the specimen needs to be embedded into a resin or an epoxy, and then can be sliced with a glass or diamond knife. At DTU Nanolab Cen we can offer only glass knifes. We also offer the possibility to make glass knives using the LKB Knifemaker 7801A.


Risk Assessment of RMC MT-7 Microtome: File:APV RMC Microtome.pdf

Manual of LKB Knifemaker 7801A: File:LKB Knifemaker 7800B Manual.pdf


For further information about the machine usage contact afull@dtu.dk [2].

LKB Knifemaker and RMC MT-7 Microtome Location at DTU Nanolab Building 314



Leica EM UC7

The Leica ultramicrotome is used for ultra thin sectioning of sample embedded in resin block. Glass or diamond knife is used for ultra sectioning of the samples.


Operating manual: File:EM UC7 Operating manual.pdf

Risk Assessment: File:Risk assessment-Ultramicrotome EM UC7.docx


For further information about the machine usage contact mktracy@dtu.dk [3].

Leica EM UC7 Location at DTU Nanolab Building 307, Room 906




Cryo-Ultramicrotome Leica EM FC7

Operating manual: File:EM FC7 Operating manual.pdf

Risk Assessment: File:Risk assessment-Cryo-Ultramicrotome EM FC7.docx


For further information about the machine usage contact mktracy@dtu.dk [4].

Leica EM FC7 Location at DTU Nanolab Building 307, Room 906



Critical point dryer

Leica EM CPD300

The Critical Point Drier (CPD) is used for drying samples for the SEM. The machine uses the fact that at the critical point the solvent can be converted from liquid to gas without crossing the interfaces between liquid and gas (no surface tension) and hence no sample drying artefacts. CO2 is the solvent of choice as its triple point is suitable for biological samples (31°C and 74 bars). The CO2 is not miscible with water; therefore the sample should be dissolved in acetone or ethanol.


Operating manual: File:EM CPD300 Operating manual.pdf

Risk Assessment: File:Risk assessment- Leica EM CPD300.pdf.


For further information on the machine usage contact mktracy@dtu.dk [5].

Leica EM CPD300 Location at DTU Nanolab Building 314


Centrifuge

The Mini Spinner Eppendorf is a desktop centrifuge with supplied rotor with maximum speed/force 13,400rpm/12,100xG. It has a 30-minute timer, which is settable in 15-sec increments. It has a short-spin mode fixed at maximum speed. The Mini Spinner Eppendorf is located in building 314, in the Soft Mater (toxic) Lab.

For further information on the machine usage contact mktracy@dtu.dk [6].

Location at DTU Nanolab Building 314


pH meter

If you are planning on doing chemical fixation on biological samples you will probably need to make buffers and use a pH-meter. The pH-meter (model pH 1000L) is located in building 314, in the Soft Mater (toxic) Lab and it is dedicated to “Soft Matter” related work.

For further information on the machine usage contact mktracy@dtu.dk [7].

Location at DTU Nanolab Building 314



Feedback to this page: click here